Mutation and Variation

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GRE Subject Test: Biochemistry, Cell, and Molecular Biology › Mutation and Variation

Questions 1 - 10
1

Which of the following genotypes represents an individual with Turner syndrome?

XO

XXX

YO

XXY

XYY

Explanation

Individuals with Turners Syndrome have the XO genotype. They are phenotypically female but experience abnormalities. XXY is the genotype of an individual with Klinefelter syndrome. Individuals with the genotype XYY have what is known as XYY syndrome and are phenotypically normal, though they may be taller, and secrete excess testosterone. Triple-X syndrome is cause by an XXX genotype, and individuals are phenotypically normal. Lack of an X chromosome is lethal in humans.

2

Which of the following genotypes represents an individual with Turner syndrome?

XO

XXX

YO

XXY

XYY

Explanation

Individuals with Turners Syndrome have the XO genotype. They are phenotypically female but experience abnormalities. XXY is the genotype of an individual with Klinefelter syndrome. Individuals with the genotype XYY have what is known as XYY syndrome and are phenotypically normal, though they may be taller, and secrete excess testosterone. Triple-X syndrome is cause by an XXX genotype, and individuals are phenotypically normal. Lack of an X chromosome is lethal in humans.

3

Which of the following methods results in no loss of information when repairing a double-stranded DNA break?

Recombination

Non-homologous end joining

There is no way to prevent loss of information from a double-stranded break in DNA

Translesion synthesis

Explanation

Recombination between homologous chromosomes is one of the only methods for repairing double-stranded breaks in DNA without losing information. This method only works, however, if there is an extra copy of the same DNA in the cell (i.e. on a homologous chromosome). Recombination is not possible prior to the S phase of the cell cycle, during which DNA is replicated.

Non-homologous end joining results in the deletion of a few base pairs, which can be problematic if done in the coding region of a gene. Translesion synthesis actually has nothing to do with double-stranded breaks, and refers to a method of accurately synthesizing DNA over mutations (such as thymine dimers) by using specialized polymerases.

4

Which of the following methods results in no loss of information when repairing a double-stranded DNA break?

Recombination

Non-homologous end joining

There is no way to prevent loss of information from a double-stranded break in DNA

Translesion synthesis

Explanation

Recombination between homologous chromosomes is one of the only methods for repairing double-stranded breaks in DNA without losing information. This method only works, however, if there is an extra copy of the same DNA in the cell (i.e. on a homologous chromosome). Recombination is not possible prior to the S phase of the cell cycle, during which DNA is replicated.

Non-homologous end joining results in the deletion of a few base pairs, which can be problematic if done in the coding region of a gene. Translesion synthesis actually has nothing to do with double-stranded breaks, and refers to a method of accurately synthesizing DNA over mutations (such as thymine dimers) by using specialized polymerases.

5

Which of the following terms best describes non-random association of alleles at different loci?

Linkage disequilibrium

Linkage equilibrium

None of the other answers

Independent assortment

Crossing over

Explanation

The correct answer is linkage disequilibrium. This phenomenon occurs when two alleles do not segregate independently even though they are at different loci. Rather, they are statistically associated with one another above non-random conditions. This is important for understanding evolution of organisms from a common ancestor as well as for identification of disease-associated mutations or single nucleotide polymorphisms.

6

Which of the following terms best describes non-random association of alleles at different loci?

Linkage disequilibrium

Linkage equilibrium

None of the other answers

Independent assortment

Crossing over

Explanation

The correct answer is linkage disequilibrium. This phenomenon occurs when two alleles do not segregate independently even though they are at different loci. Rather, they are statistically associated with one another above non-random conditions. This is important for understanding evolution of organisms from a common ancestor as well as for identification of disease-associated mutations or single nucleotide polymorphisms.

7

When mutations occur after the embryo has been fertilized and result in two or more genetically distinct populations of cells is best described as which of the following?

Mosaicism

Chimera

Non-disjunction

Aneuploidy

None of the other answers

Explanation

The correct answer is mosaicism. Mosaicism within an organism occurs when mutations, such as non-disjunction, occur in a subset of cells to give rise to genetically distinct cell populations. Chimeras also have genetically distinct cell populations, however, they occur from the fusion of two fertilized embryos. Aneuploidy occurs when an organism has an incorrect, but consistent number of chromosomes.

8

When mutations occur after the embryo has been fertilized and result in two or more genetically distinct populations of cells is best described as which of the following?

Mosaicism

Chimera

Non-disjunction

Aneuploidy

None of the other answers

Explanation

The correct answer is mosaicism. Mosaicism within an organism occurs when mutations, such as non-disjunction, occur in a subset of cells to give rise to genetically distinct cell populations. Chimeras also have genetically distinct cell populations, however, they occur from the fusion of two fertilized embryos. Aneuploidy occurs when an organism has an incorrect, but consistent number of chromosomes.

9

A researcher has finally managed to design a plasmid that will allow him to begin expressing an important recombinant protein. After analyzing the sequencing data of the plasmid, however, he discovers that a mutation has occurred in the coding region of his protein. If he still wishes to express the wild type protein, does he need to construct a new plasmid?

It depends; a silent mutation would not affect the structure of the protein

It depends; a frameshift mutation would not affect the structure of the protein

Yes; any mutation is undesirable and will affect the protein's function

No; one mutation should not affect the overall protein's function

Explanation

This question is somewhat vague because we are given no other information other than the fact that there is a "mutation". Mutations can take many different forms and, therefore, we would need to know more information about the specific type of mutation before we can say whether or not the plasmid still contains a functional gene for the wild type protein. In particular, a silent mutation would result in the insertion of the exact same amino acid despite having a different codon (this is due to the redundancy of the genetic code). If a silent mutation has altered the sequence of the plasmid, it will not alter the structure or function of the protein and the plasmid will still be effective.

A frameshift mutation, however, would have disastrous effects on the protein as the translational reading frame would be shifted and the protein would most likely be truncated and nonfunctional.

10

A researcher has finally managed to design a plasmid that will allow him to begin expressing an important recombinant protein. After analyzing the sequencing data of the plasmid, however, he discovers that a mutation has occurred in the coding region of his protein. If he still wishes to express the wild type protein, does he need to construct a new plasmid?

It depends; a silent mutation would not affect the structure of the protein

It depends; a frameshift mutation would not affect the structure of the protein

Yes; any mutation is undesirable and will affect the protein's function

No; one mutation should not affect the overall protein's function

Explanation

This question is somewhat vague because we are given no other information other than the fact that there is a "mutation". Mutations can take many different forms and, therefore, we would need to know more information about the specific type of mutation before we can say whether or not the plasmid still contains a functional gene for the wild type protein. In particular, a silent mutation would result in the insertion of the exact same amino acid despite having a different codon (this is due to the redundancy of the genetic code). If a silent mutation has altered the sequence of the plasmid, it will not alter the structure or function of the protein and the plasmid will still be effective.

A frameshift mutation, however, would have disastrous effects on the protein as the translational reading frame would be shifted and the protein would most likely be truncated and nonfunctional.

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